mirror of
https://github.com/infiniflow/ragflow.git
synced 2025-12-08 20:42:30 +08:00
### What problem does this PR solve?
add fallback to `calamine` engine when parse error raised using the
default `openpyxl` / `xlrd` engine.
e.g. the following error can be fixed:
```
Traceback (most recent call last):
File "/ragflow/deepdoc/parser/excel_parser.py", line 53, in _load_excel_to_workbook
df = pd.read_excel(file_like_object)
File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_base.py", line 495, in read_excel
io = ExcelFile(
File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_base.py", line 1567, in __init__
self._reader = self._engines[engine](
File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_xlrd.py", line 46, in __init__
super().__init__(
File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_base.py", line 573, in __init__
self.book = self.load_workbook(self.handles.handle, engine_kwargs)
File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_xlrd.py", line 63, in load_workbook
return open_workbook(file_contents=data, **engine_kwargs)
File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/__init__.py", line 172, in open_workbook
bk = open_workbook_xls(
File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/book.py", line 68, in open_workbook_xls
bk.biff2_8_load(
File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/book.py", line 641, in biff2_8_load
cd.locate_named_stream(UNICODE_LITERAL(qname))
File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/compdoc.py", line 398, in locate_named_stream
result = self._locate_stream(
File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/compdoc.py", line 429, in _locate_stream
raise CompDocError("%s corruption: seen[%d] == %d" % (qname, s, self.seen[s]))
xlrd.compdoc.CompDocError: Workbook corruption: seen[2] == 4
```
### Type of change
- [x] Bug Fix (non-breaking change which fixes an issue)
157 lines
5.5 KiB
Python
157 lines
5.5 KiB
Python
# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.
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# You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
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# limitations under the License.
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#
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import logging
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import sys
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from io import BytesIO
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import pandas as pd
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from openpyxl import Workbook, load_workbook
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from rag.nlp import find_codec
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class RAGFlowExcelParser:
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@staticmethod
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def _load_excel_to_workbook(file_like_object):
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if isinstance(file_like_object, bytes):
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file_like_object = BytesIO(file_like_object)
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# Read first 4 bytes to determine file type
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file_like_object.seek(0)
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file_head = file_like_object.read(4)
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file_like_object.seek(0)
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if not (file_head.startswith(b'PK\x03\x04') or file_head.startswith(b'\xD0\xCF\x11\xE0')):
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logging.info("Not an Excel file, converting CSV to Excel Workbook")
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try:
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file_like_object.seek(0)
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df = pd.read_csv(file_like_object)
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return RAGFlowExcelParser._dataframe_to_workbook(df)
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except Exception as e_csv:
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raise Exception(f"Failed to parse CSV and convert to Excel Workbook: {e_csv}")
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try:
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return load_workbook(file_like_object,data_only= True)
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except Exception as e:
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logging.info(f"openpyxl load error: {e}, try pandas instead")
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try:
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file_like_object.seek(0)
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try:
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df = pd.read_excel(file_like_object)
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return RAGFlowExcelParser._dataframe_to_workbook(df)
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except Exception as ex:
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logging.info(f"pandas with default engine load error: {ex}, try calamine instead")
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file_like_object.seek(0)
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df = pd.read_excel(file_like_object, engine='calamine')
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return RAGFlowExcelParser._dataframe_to_workbook(df)
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except Exception as e_pandas:
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raise Exception(f"pandas.read_excel error: {e_pandas}, original openpyxl error: {e}")
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@staticmethod
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def _dataframe_to_workbook(df):
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wb = Workbook()
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ws = wb.active
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ws.title = "Data"
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for col_num, column_name in enumerate(df.columns, 1):
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ws.cell(row=1, column=col_num, value=column_name)
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for row_num, row in enumerate(df.values, 2):
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for col_num, value in enumerate(row, 1):
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ws.cell(row=row_num, column=col_num, value=value)
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return wb
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def html(self, fnm, chunk_rows=256):
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file_like_object = BytesIO(fnm) if not isinstance(fnm, str) else fnm
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wb = RAGFlowExcelParser._load_excel_to_workbook(file_like_object)
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tb_chunks = []
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for sheetname in wb.sheetnames:
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ws = wb[sheetname]
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rows = list(ws.rows)
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if not rows:
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continue
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tb_rows_0 = "<tr>"
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for t in list(rows[0]):
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tb_rows_0 += f"<th>{t.value}</th>"
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tb_rows_0 += "</tr>"
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for chunk_i in range((len(rows) - 1) // chunk_rows + 1):
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tb = ""
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tb += f"<table><caption>{sheetname}</caption>"
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tb += tb_rows_0
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for r in list(
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rows[1 + chunk_i * chunk_rows: 1 + (chunk_i + 1) * chunk_rows]
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):
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tb += "<tr>"
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for i, c in enumerate(r):
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if c.value is None:
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tb += "<td></td>"
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else:
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tb += f"<td>{c.value}</td>"
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tb += "</tr>"
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tb += "</table>\n"
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tb_chunks.append(tb)
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return tb_chunks
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def __call__(self, fnm):
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file_like_object = BytesIO(fnm) if not isinstance(fnm, str) else fnm
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wb = RAGFlowExcelParser._load_excel_to_workbook(file_like_object)
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res = []
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for sheetname in wb.sheetnames:
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ws = wb[sheetname]
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rows = list(ws.rows)
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if not rows:
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continue
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ti = list(rows[0])
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for r in list(rows[1:]):
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fields = []
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for i, c in enumerate(r):
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if not c.value:
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continue
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t = str(ti[i].value) if i < len(ti) else ""
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t += (":" if t else "") + str(c.value)
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fields.append(t)
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line = "; ".join(fields)
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if sheetname.lower().find("sheet") < 0:
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line += " ——" + sheetname
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res.append(line)
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return res
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@staticmethod
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def row_number(fnm, binary):
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if fnm.split(".")[-1].lower().find("xls") >= 0:
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wb = RAGFlowExcelParser._load_excel_to_workbook(BytesIO(binary))
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total = 0
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for sheetname in wb.sheetnames:
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ws = wb[sheetname]
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total += len(list(ws.rows))
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return total
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if fnm.split(".")[-1].lower() in ["csv", "txt"]:
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encoding = find_codec(binary)
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txt = binary.decode(encoding, errors="ignore")
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return len(txt.split("\n"))
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if __name__ == "__main__":
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psr = RAGFlowExcelParser()
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psr(sys.argv[1])
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